Transcript: lnc-COX6C-3:5

Basic information

LNCipedia transcript ID: lnc-COX6C-3:5 
LNCipedia gene ID: lnc-COX6C-3
Location (hg38): chr8:99764657-99782722
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 526 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103357.1|ENCT00000438492.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -782.3154 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX6C-3:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COX6C-3:5
5.0 lnc-COX6C-3:5
5.1 lnc-ZNF706-59:5
5.2 lnc-COX6C-3:5