Transcript: lnc-COX7A2-1:1

Basic information

LNCipedia transcript ID: lnc-COX7A2-1:1 
LNCipedia gene ID: lnc-COX7A2-1
Location (hg38): chr6:75089160-75101911
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 571 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT113598
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1304.7899 non-coding 
CPAT coding probability 82.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-COX7A2-1:1 no no no no

Available literature

  1. Wang (2016), Transcriptome Analysis of Long Noncoding RNAs in Toll-Like Receptor 3-Activated Mesenchymal Stem Cells., Stem Cells Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX7A2-1:1
4.0 lnc-COX7A2-1:1
4.1 lnc-COX7A2-1:1
5.0 lnc-COX7A2-1:1
5.1 lnc-CEP162-63:1
5.2 lnc-COX7A2-1:1