Transcript: lnc-CPEB4-4:1

Basic information

LNCipedia transcript ID: lnc-CPEB4-4:1 
LNCipedia gene ID: lnc-CPEB4-4
Location (hg38): chr5:173578970-173581580
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1741 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010180; NONHSAT105194
Alternative gene names: XLOC_004642; linc-CPEB4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.1634 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPEB4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPEB4-4:1
3.1 lnc-CPEB4-4:1
4.0 lnc-CPEB4-4:1
4.1 lnc-CPEB4-4:1
5.0 lnc-CPEB4-4:1
5.1 lnc-ATP6V0E1-26:1
5.2 lnc-CPEB4-4:1