Transcript: lnc-CPO-4:3

Basic information

LNCipedia transcript ID: lnc-CPO-4:3 
LNCipedia gene ID: lnc-CPO-4
Location (hg38): chr2:207166138-207228808
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1190 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000046390.1|MICT00000206426.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -133.3136 non-coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPO-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPO-4:3
5.0 lnc-CPO-4:3
5.1 lnc-CPS1-44:2
5.2 lnc-CPO-4:3