Transcript: lnc-CPT2-3:6

Basic information

LNCipedia transcript ID: lnc-CPT2-3:6 
LNCipedia gene ID: lnc-CPT2-3
Location (hg38): chr1:53238597-53245593
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3531 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226754.1|MICT00000011239.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.3452 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPT2-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPT2-3:6
5.0 lnc-CPT2-3:6
5.1 lnc-PODN-5:4
5.2 lnc-CPT2-3:6