Transcript: lnc-CPVL-4:9

Basic information

LNCipedia transcript ID: lnc-CPVL-4:9 
LNCipedia gene ID: lnc-CPVL-4
Location (hg38): chr7:29510175-29563691
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1402 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223813.2|MICT00000320795.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.9799 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPVL-4:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPVL-4:9
5.0 lnc-CPVL-4:9
5.1 lnc-PDE1C-26:2
5.2 lnc-CPVL-4:9