Transcript: lnc-CPXM2-1:4

Basic information

LNCipedia transcript ID: lnc-CPXM2-1:4 
LNCipedia gene ID: lnc-CPXM2-1
Location (hg38): chr10:123943296-123955143
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2338 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_397_chr10:125702811-125705022_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.4727 non-coding 
CPAT coding probability 4.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPXM2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPXM2-1:4
4.0 lnc-CPXM2-1:4
4.1 lnc-CPXM2-1:4
5.0 lnc-CPXM2-1:4
5.1 lnc-UROS-25:4
5.2 lnc-CPXM2-1:4