Transcript: lnc-CRB3-1:2

Basic information

LNCipedia transcript ID: lnc-CRB3-1:2 
LNCipedia gene ID: lnc-CRB3-1
Ensembl Gene ID: ENSG00000268191
Ensembl Transcript ID: ENST00000596027
Location (hg38): chr19:6494320-6495025
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 520 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060769; ENST00000596027.1
Alternative gene names: ENSG00000268191.1; CTD-2396E7.10; AC010503.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.5253 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRB3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRB3-1:2
4.0 lnc-CRB3-1:2
4.1 lnc-CRB3-1:2
5.0 lnc-CRB3-1:2
5.1 lnc-TRIP10-9:2
5.2 lnc-CRB3-1:2