Transcript: lnc-CREB5-2:6

Basic information

LNCipedia transcript ID: lnc-CREB5-2:6 
LNCipedia gene ID: lnc-CREB5-2
Ensembl Gene ID: ENSG00000272568
Ensembl Transcript ID: ENST00000609389
Location (hg38): chr7:28979967-29013367
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3695 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609389.1; ENST00000609389.5
Alternative gene names: ENSG00000272568.1; CTB-113D17.1; ENSG00000272568.5; AC005162.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.5607 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CREB5-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CREB5-2:6
4.0 lnc-CREB5-2:6
4.1 lnc-CREB5-2:6
5.0 lnc-CREB5-2:6
5.1 lnc-MTURN-32:6
5.2 lnc-CREB5-2:6