Transcript: lnc-CRIM1-1:11

Basic information

LNCipedia transcript ID: lnc-CRIM1-1:11 
LNCipedia gene ID: lnc-CRIM1-1
Location (hg38): chr2:35162786-35173031
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606126.1
Alternative gene names: ENSG00000226994.3; AC012593.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.0975 non-coding 
CPAT coding probability 5.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRIM1-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRIM1-1:11
4.0 lnc-CRIM1-1:11
4.1 lnc-CRIM1-1:11
5.0 lnc-CRIM1-1:11
5.1 lnc-RASGRP3-1:18
5.2 lnc-CRIM1-1:11