Transcript: lnc-CRIM1-1:15

Basic information

LNCipedia transcript ID: lnc-CRIM1-1:15 
LNCipedia gene ID: lnc-CRIM1-1
Ensembl Gene ID: ENSG00000226994
Ensembl Transcript ID: ENST00000627058
Location (hg38): chr2:35159147-35172915
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000627058.2
Alternative gene names: ENSG00000226994.7; AC012593.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.7408 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRIM1-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CRIM1-1:15
4.1 lnc-CRIM1-1:15
5.0 lnc-CRIM1-1:15
5.1 lnc-RASGRP3-1:15
5.2 lnc-CRIM1-1:15