Transcript: lnc-CRIM1-1:16

Basic information

LNCipedia transcript ID: lnc-CRIM1-1:16 
LNCipedia gene ID: lnc-CRIM1-1
Ensembl Gene ID: ENSG00000226994
Ensembl Transcript ID: ENST00000606126
Location (hg38): chr2:35162786-35173311
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 818 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606126.3
Alternative gene names: ENSG00000226994.7; AC012593.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.1183 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRIM1-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CRIM1-1:16
4.1 lnc-CRIM1-1:16
5.0 lnc-CRIM1-1:16
5.1 lnc-RASGRP3-1:19
5.2 lnc-CRIM1-1:16