Transcript: lnc-CROCC-1:6

Basic information

LNCipedia transcript ID: lnc-CROCC-1:6 
LNCipedia gene ID: lnc-CROCC-1
Location (hg38): chr1:16620415-16624937
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2866 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000501442; NONHSAT001161
Alternative gene names: ENSG00000245549; AL137798.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.1089 non-coding 
CPAT coding probability 17.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CROCC-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL137798.1-1:1
3.1 lnc-AL137798.1-1:1
4.0 lnc-AL137798.1-1:1
4.1 lnc-AL137798.1-1:1
5.0 lnc-AL137798.1-1:1
5.1 lnc-SZRD1-11:1
5.2 lnc-CROCC-1:6