Transcript: lnc-CSNK1G2-3:1

Basic information

LNCipedia transcript ID: lnc-CSNK1G2-3:1 
LNCipedia gene ID: lnc-CSNK1G2-3
Location (hg38): chr19:2024340-2024594
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 255 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT060395; FPKM1_group_14318_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.3618 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CSNK1G2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSNK1G2-3:1
4.0 lnc-CSNK1G2-3:1
4.1 lnc-CSNK1G2-3:1
5.0 lnc-CSNK1G2-3:1
5.1 lnc-RPL36-106:1
5.2 lnc-CSNK1G2-3:1