Transcript: lnc-CSPP1-1:3

Basic information

LNCipedia transcript ID: lnc-CSPP1-1:3 
LNCipedia gene ID: lnc-CSPP1-1
RefSeq ID: NR_136224
Location (hg38): chr8:67343834-67491868
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1597 bp
Exons: 5
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT127083; NR_136224.1
Alternative gene names: LOC102724708


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.3164 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CSPP1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSPP1-1:3
4.0 lnc-CSPP1-1:3
4.1 lnc-CSPP1-1:3
5.0 lnc-CSPP1-1:3
5.1 lnc-SGK3-13:5
5.2 lnc-CSPP1-1:3