Transcript: lnc-CSRNP3-10:1

Basic information

LNCipedia transcript ID: lnc-CSRNP3-10:1 
LNCipedia gene ID: lnc-CSRNP3-10
Location (hg38): chr2:165980717-165984768
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 202 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003928; NONHSAT075274
Alternative gene names: XLOC_001740; linc-XIRP2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.7117 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CSRNP3-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CSRNP3-2:1
3.1 lnc-CSRNP3-3:1
4.0 TTC21B-AS1:18
4.1 TTC21B-AS1:18
5.0 TTC21B-AS1:18
5.1 lnc-PHOSPHO2-27:1
5.2 lnc-CSRNP3-10:1