Transcript: lnc-CST11-2:2

Basic information

LNCipedia transcript ID: lnc-CST11-2:2 
LNCipedia gene ID: lnc-CST11-2
Location (hg38): chr20:23518204-23519030
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 744 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028346; NONHSAT079071
Alternative gene names: XLOC_013694; linc-CST11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.1677 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CST11-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CST9LP1-1:1
3.1 lnc-CST9LP1-2:1
4.0 lnc-CST9LP1-2:1
4.1 lnc-CST9LP1-2:1
5.0 lnc-CST9LP1-2:1
5.1 lnc-CST4-6:2
5.2 lnc-CST11-2:2