Transcript: lnc-CST11-2:4

Basic information

LNCipedia transcript ID: lnc-CST11-2:4 
LNCipedia gene ID: lnc-CST11-2
Location (hg38): chr20:23514737-23519024
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 533 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028345; NONHSAT079067
Alternative gene names: XLOC_013694; linc-CST11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.8887 non-coding 
CPAT coding probability 13.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CST11-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CST9LP1-1:2
3.1 lnc-CST9LP1-2:2
4.0 lnc-CST9LP1-2:2
4.1 lnc-CST9LP1-2:2
5.0 lnc-CST9LP1-2:2
5.1 lnc-CST4-6:4
5.2 lnc-CST11-2:4