Transcript: lnc-CT55-5:1

Basic information

LNCipedia transcript ID: lnc-CT55-5:1 
LNCipedia gene ID: lnc-CT55-5
Location (hg38): chrX:135318088-135319718
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1171 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT138693
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.655 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CT55-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf48-5:1
4.0 lnc-CXorf48-5:1
4.1 lnc-CXorf48-5:1
5.0 lnc-CXorf48-5:1
5.1 lnc-ETDB-9:1
5.2 lnc-CT55-5:1