Transcript: lnc-CTAGE1-9:12

Basic information

LNCipedia transcript ID: lnc-CTAGE1-9:12 
LNCipedia gene ID: lnc-CTAGE1-9
Location (hg38): chr18:22688249-22873071
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1331 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265943.1|HBMT00000668435.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.7284 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTAGE1-9:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTAGE1-1:19
5.0 lnc-CTAGE1-1:19
5.1 lnc-SMAD2-198:12
5.2 lnc-CTAGE1-9:12