Transcript: lnc-CTBS-4:6

Basic information

LNCipedia transcript ID: lnc-CTBS-4:6 
LNCipedia gene ID: lnc-CTBS-4
RefSeq ID: NR_125761
Location (hg38): chr1:84597964-84621031
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125761; NR_125761.1
Alternative gene names: LINC01461


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.2096 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTBS-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf180-1:7
4.0 lnc-C1orf180-1:7
4.1 lnc-C1orf180-1:7
5.0 lnc-C1orf180-1:7
5.1 lnc-RBMXL1-47:6
5.2 lnc-CTBS-4:6