Transcript: lnc-CTBS-4:8

Basic information

LNCipedia transcript ID: lnc-CTBS-4:8 
LNCipedia gene ID: lnc-CTBS-4
Location (hg38): chr1:84597952-84620990
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 528 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001552; NONHSAT004221
Alternative gene names: XLOC_000895; linc-CTBS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.2096 non-coding 
CPAT coding probability 16.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTBS-4:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf180-1:2
3.1 lnc-C1orf180-1:1
4.0 lnc-C1orf180-1:1
4.1 lnc-C1orf180-1:1
5.0 lnc-C1orf180-1:1
5.1 lnc-RBMXL1-47:8
5.2 lnc-CTBS-4:8