Transcript: lnc-CTDSP2-2:17

Basic information

LNCipedia transcript ID: lnc-CTDSP2-2:17 
LNCipedia gene ID: lnc-CTDSP2-2
Location (hg38): chr12:57930035-57941398
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1847 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257698.1|HBMT00000335330.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.1614 non-coding 
CPAT coding probability 3.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTDSP2-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTDSP2-2:17
5.0 lnc-CTDSP2-2:17
5.1 lnc-PMEL-75:2
5.2 lnc-CTDSP2-2:17