Transcript: lnc-CTDSP2-2:3

Basic information

LNCipedia transcript ID: lnc-CTDSP2-2:3 
LNCipedia gene ID: lnc-CTDSP2-2
Location (hg38): chr12:57932614-57936167
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020813; NONHSAT029004
Alternative gene names: XLOC_010102; linc-CTDSP2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -313.8257 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTDSP2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTDSP2-2:2
3.1 lnc-CTDSP2-2:3
4.0 lnc-CTDSP2-2:3
4.1 lnc-CTDSP2-2:3
5.0 lnc-CTDSP2-2:3
5.1 lnc-PMEL-75:10
5.2 lnc-CTDSP2-2:3