Transcript: lnc-CTIF-1:4

Basic information

LNCipedia transcript ID: lnc-CTIF-1:4 
LNCipedia gene ID: lnc-CTIF-1
Location (hg38): chr18:49021725-49043715
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4087 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264269.1|MICT00000162013.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.5887 non-coding 
CPAT coding probability 4.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTIF-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTIF-1:4
5.0 lnc-CTIF-1:4
5.1 lnc-CTIF-1:4
5.2 lnc-CTIF-1:4