Transcript: lnc-CTNND2-10:4

Basic information

LNCipedia transcript ID: lnc-CTNND2-10:4 
LNCipedia gene ID: lnc-CTNND2-10
Location (hg38): chr5:10748083-10761101
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 277 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100485
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 595.1721 coding 
CPAT coding probability 38.69% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CTNND2-10:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1C1.5.1-10:4
4.0 lnc-RP11-1C1.5.1-10:4
4.1 lnc-RP11-1C1.5.1-10:4
5.0 lnc-RP11-1C1.5.1-10:4
5.1 lnc-IRX2-150:4
5.2 lnc-CTNND2-10:4