Transcript: lnc-CTSF-2:1

Basic information

LNCipedia transcript ID: lnc-CTSF-2:1 
LNCipedia gene ID: lnc-CTSF-2
Location (hg38): chr11:66535898-66537936
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2039 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT022314; ENST00000602427.1
Alternative gene names: ENSG00000269990.1; CTD-3074O7.12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.6855 non-coding 
CPAT coding probability 12.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSF-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTSF-2:1
4.0 lnc-CTSF-2:1
4.1 lnc-CTSF-2:1
5.0 lnc-CTSF-2:1
5.1 lnc-POLD4-22:1
5.2 lnc-CTSF-2:1