Transcript: lnc-CTSO-2:1

Basic information

LNCipedia transcript ID: lnc-CTSO-2:1 
LNCipedia gene ID: lnc-CTSO-2
Location (hg38): chr4:156772789-156873972
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 522 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT098956
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -296.5971 non-coding 
CPAT coding probability 15.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSO-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-171N4.2.1-2:3
4.0 lnc-RP11-171N4.2.1-2:3
4.1 lnc-RP11-171N4.2.1-2:3
5.0 lnc-RP11-171N4.2.1-2:3
5.1 lnc-FAM198B-7:1
5.2 lnc-CTSO-2:1