Transcript: lnc-CTSZ-2:6

Basic information

LNCipedia transcript ID: lnc-CTSZ-2:6 
LNCipedia gene ID: lnc-CTSZ-2
Location (hg38): chr20:58881750-58888810
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 368 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225806.3|ENST00000424434.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -356.1673 non-coding 
CPAT coding probability 2.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSZ-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTSZ-2:6
5.0 lnc-CTSZ-2:6
5.1 lnc-SPATA2-113:7
5.2 lnc-CTSZ-2:6