Transcript: lnc-CWC15-2:2

Basic information

LNCipedia transcript ID: lnc-CWC15-2:2 
LNCipedia gene ID: lnc-CWC15-2
Location (hg38): chr11:94970490-94973572
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 903 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000539856.1; CWC15-005; OTTHUMT00000397862.1; NONHSAT023747
Alternative gene names: ENSG00000150316.7; CWC15; OTTHUMG00000167863.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1733.5584 coding 
CPAT coding probability 44.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CWC15-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SESN3-2:4
4.0 lnc-SESN3-2:4
4.1 lnc-SESN3-2:4
5.0 lnc-SESN3-2:4
5.1 lnc-NOX4-55:2
5.2 lnc-CWC15-2:2