Transcript: lnc-CWC15-2:3

Basic information

LNCipedia transcript ID: lnc-CWC15-2:3 
LNCipedia gene ID: lnc-CWC15-2
Location (hg38): chr11:94970964-94973546
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 921 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000542165.1; CWC15-002; OTTHUMT00000397864.1; NONHSAT023749
Alternative gene names: ENSG00000150316.7; CWC15; OTTHUMG00000167863.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1082.4443 coding 
CPAT coding probability 16.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CWC15-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SESN3-2:5
4.0 lnc-SESN3-2:5
4.1 lnc-SESN3-2:5
5.0 lnc-SESN3-2:5
5.1 lnc-NOX4-55:3
5.2 lnc-CWC15-2:3