Transcript: lnc-CXADR-2:1

Basic information

LNCipedia transcript ID: lnc-CXADR-2:1 
LNCipedia gene ID: lnc-CXADR-2
Location (hg38): chr21:18003584-18006284
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2633 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000510743
Alternative gene names: ENSG00000250851


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3635 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CXADR-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CXADR-1:1
3.1 lnc-CXADR-2:1
4.0 lnc-CXADR-2:1
4.1 lnc-CXADR-2:1
5.0 lnc-CXADR-2:1
5.1 lnc-OLIG1-115:2
5.2 lnc-CXADR-2:1