Transcript: lnc-CXorf49-4:1

Basic information

LNCipedia transcript ID: lnc-CXorf49-4:1 
LNCipedia gene ID: lnc-CXorf49-4
Location (hg38): chrX:71780527-71784696
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 651 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00017335
Alternative gene names: XLOC_008182; linc-CXorf49B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.3459 non-coding 
CPAT coding probability 25.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CXorf49-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CXCR3-4:1
3.1 lnc-CXCR3-4:1
4.0 lnc-CXCR3-4:1
4.1 lnc-CXCR3-4:1
5.0 lnc-CXCR3-4:1
5.1 lnc-ZMYM3-29:1
5.2 lnc-CXorf49-4:1