Transcript: lnc-CXorf49-4:3

Basic information

LNCipedia transcript ID: lnc-CXorf49-4:3 
LNCipedia gene ID: lnc-CXorf49-4
RefSeq ID: NR_034004
Location (hg38): chrX:71778169-71784378
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1064 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034004.1
Alternative gene names: LOC100132741


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.7574 non-coding 
CPAT coding probability 25.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CXorf49-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZMYM3-29:3
5.1 lnc-ZMYM3-29:3
5.2 lnc-CXorf49-4:3