Transcript: lnc-CYB5D2-4:2

Basic information

LNCipedia transcript ID: lnc-CYB5D2-4:2 
LNCipedia gene ID: lnc-CYB5D2-4
Location (hg38): chr17:4264042-4268426
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1936 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000030502.1|MICT00000139910.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -88.6223 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5D2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYB5D2-4:2
5.0 lnc-CYB5D2-4:2
5.1 lnc-RPA1-77:1
5.2 lnc-CYB5D2-4:2