Transcript: lnc-CYB5R2-1:13

Basic information

LNCipedia transcript ID: lnc-CYB5R2-1:13 
LNCipedia gene ID: lnc-CYB5R2-1
Ensembl Gene ID: ENSG00000276668
Ensembl Transcript ID: ENST00000611809
Location (hg38): chr11:7699562-7699988
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 427 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611809.1
Alternative gene names: ENSG00000276668.1; RP11-35J10.7; AC104237.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.3016 non-coding 
CPAT coding probability 18.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CYB5R2-8:1
4.1 lnc-CYB5R2-1:13
5.0 lnc-CYB5R2-1:13
5.1 lnc-OR10A6-5:11
5.2 lnc-CYB5R2-1:13