Transcript: lnc-CYB5R2-3:10

Basic information

LNCipedia transcript ID: lnc-CYB5R2-3:10 
LNCipedia gene ID: lnc-CYB5R2-3
Location (hg38): chr11:7512143-7513653
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1511 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT017787
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.1713 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-3:10 yes no no no

Available literature

  1. Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYB5R2-3:10
4.0 lnc-CYB5R2-3:10
4.1 lnc-CYB5R2-3:10
5.0 lnc-CYB5R2-3:10
5.1 lnc-OR10A6-11:1
5.2 lnc-CYB5R2-3:10