Transcript: lnc-CYB5R2-3:20

Basic information

LNCipedia transcript ID: lnc-CYB5R2-3:20 
LNCipedia gene ID: lnc-CYB5R2-3
Location (hg38): chr11:7433879-7513642
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9819 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251364.2|MICT00000054170.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.6097 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-3:20 no no no no

Available literature

  1. Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYB5R2-3:20
5.0 lnc-CYB5R2-3:20
5.1 lnc-OR10A6-11:6
5.2 lnc-CYB5R2-3:20