Transcript: lnc-CYB5R2-3:21

Basic information

LNCipedia transcript ID: lnc-CYB5R2-3:21 
LNCipedia gene ID: lnc-CYB5R2-3
RefSeq ID: NR_103855
Location (hg38): chr11:7437627-7465835
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4508 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103855.1
Alternative gene names: LOC100506258


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -55.4521 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYB5R2-3:21 no no no no

Available literature

  1. Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-OR10A6-11:12
5.1 lnc-OR10A6-11:12
5.2 lnc-CYB5R2-3:21