Transcript: lnc-CYLD-2:16

Basic information

LNCipedia transcript ID: lnc-CYLD-2:16 
HGNC Gene Symbol: lnc-CYLD-2    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2128
Ensembl Gene ID: ENSG00000261241
Ensembl Transcript ID: ENST00000567534
Location (hg38): chr16:50884209-50901061
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1181 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567534.2
Alternative gene names: ENSG00000261241.5; RP11-883G14.1; ENSG00000261241.6; LINC02128


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -137.9266 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYLD-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-327F22.5.1-2:6
4.1 lnc-RP11-327F22.5.1-2:6
5.0 lnc-RP11-327F22.5.1-2:6
5.1 lnc-ADGRG1-128:12
5.2 lnc-CYLD-2:16