Transcript: lnc-CYS1-1:12

Basic information

LNCipedia transcript ID: lnc-CYS1-1:12 
LNCipedia gene ID: lnc-CYS1-1
Location (hg38): chr2:10038069-10043352
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2830 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260077.1|ENCT00000239002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.829 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYS1-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYS1-1:12
5.0 lnc-CYS1-1:12
5.1 lnc-RAD51AP2-107:9
5.2 lnc-CYS1-1:12