Transcript: lnc-CYS1-1:3

Basic information

LNCipedia transcript ID: lnc-CYS1-1:3 
LNCipedia gene ID: lnc-CYS1-1
Location (hg38): chr2:10042288-10043384
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 564 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT069086
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.3261 non-coding 
CPAT coding probability 3.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYS1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYS1-1:3
4.0 lnc-CYS1-1:3
4.1 lnc-CYS1-1:3
5.0 lnc-CYS1-1:3
5.1 lnc-RAD51AP2-107:8
5.2 lnc-CYS1-1:3