Transcript: lnc-CYS1-8:1

Basic information

LNCipedia transcript ID: lnc-CYS1-8:1 
LNCipedia gene ID: lnc-CYS1-8
Location (hg38): chr2:9922732-9927332
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1125 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1772_chr2:10062860-10067461_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.0169 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYS1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYS1-8:1
4.0 lnc-CYS1-8:1
4.1 lnc-CYS1-8:1
5.0 lnc-CYS1-8:1
5.1 lnc-RAD51AP2-110:1
5.2 lnc-CYS1-8:1