Transcript: lnc-CYSLTR2-2:1

Basic information

LNCipedia transcript ID: lnc-CYSLTR2-2:1 
LNCipedia gene ID: lnc-CYSLTR2-2
Location (hg38): chr13:48731545-48732175
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014761.1|FTMT25100005369.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -210.1253 non-coding 
CPAT coding probability 17.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYSLTR2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYSLTR2-2:1
5.0 lnc-CYSLTR2-2:1
5.1 lnc-KL-167:1
5.2 lnc-CYSLTR2-2:1