Transcript: lnc-DACH2-2:1

Basic information

LNCipedia transcript ID: lnc-DACH2-2:1 
LNCipedia gene ID: lnc-DACH2-2
Location (hg38): chrX:86952973-86972349
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT137775; FPKM1_group_34833_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.8627 non-coding 
CPAT coding probability 6.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DACH2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DACH2-2:1
4.0 lnc-DACH2-2:1
4.1 lnc-DACH2-2:1
5.0 lnc-DACH2-2:1
5.1 lnc-NHSL2-84:1
5.2 lnc-DACH2-2:1