Transcript: lnc-DAD1-2:1

Basic information

LNCipedia transcript ID: lnc-DAD1-2:1 
LNCipedia gene ID: lnc-DAD1-2
Ensembl Gene ID: ENSG00000251002
Ensembl Transcript ID: ENST00000514473
Location (hg38): chr14:22380680-22482959
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1951 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000514473; ENST00000514473.2; AE000661.37-006; OTTHUMT00000401530.1; NONHSAT035765
Alternative gene names: ENSG00000251002; AE000661.37; ENSG00000251002.3; OTTHUMG00000168895.2; ENSG00000251002.7; AC244502.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4511 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAD1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DAD1-1:1
3.1 lnc-DAD1-2:1
4.0 lnc-DAD1-2:1
4.1 lnc-DAD1-2:1
5.0 lnc-DAD1-2:1
5.1 lnc-OR4E1-7:7
5.2 lnc-DAD1-2:1