Transcript: lnc-DALRD3-1:12

Basic information

LNCipedia transcript ID: lnc-DALRD3-1:12 
LNCipedia gene ID: lnc-DALRD3-1
Ensembl Gene ID: ENSG00000235236
Ensembl Transcript ID: ENST00000415982
Location (hg38): chr3:48979918-48983985
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 520 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000415982.1; RP13-131K19.1-001; OTTHUMT00000345432.1; NONHSAT089628
Alternative gene names: ENSG00000235236.1; RP13-131K19.1; OTTHUMG00000156717.1; AC137630.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.5352 non-coding 
CPAT coding probability 17.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DALRD3-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DALRD3-2:1
4.0 lnc-DALRD3-2:1
4.1 lnc-DALRD3-1:12
5.0 lnc-DALRD3-1:12
5.1 lnc-CCDC71-15:12
5.2 lnc-DALRD3-1:12