Transcript: lnc-DAP-11:3

Basic information

LNCipedia transcript ID: lnc-DAP-11:3 
LNCipedia gene ID: lnc-DAP-11
Location (hg38): chr5:10563388-10564169
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 709 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079126.1|MICT00000278967.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.8019 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAP-11:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-1C1.5.1-11:2
5.0 lnc-RP11-1C1.5.1-11:2
5.1 lnc-IRX2-140:2
5.2 lnc-DAP-11:3