Transcript: lnc-DCAF10-2:4

Basic information

LNCipedia transcript ID: lnc-DCAF10-2:4 
LNCipedia gene ID: lnc-DCAF10-2
Location (hg38): chr9:37904208-37906489
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2071 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105385.1|MICT00000358304.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -129.2801 non-coding 
CPAT coding probability 23.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCAF10-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DCAF10-2:4
5.0 lnc-DCAF10-2:4
5.1 lnc-DCAF10-2:4
5.2 lnc-DCAF10-2:4