Transcript: lnc-DCAF8L2-4:1

Basic information

LNCipedia transcript ID: lnc-DCAF8L2-4:1 
LNCipedia gene ID: lnc-DCAF8L2-4
Location (hg38): chrX:27500334-27543716
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1945 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004dbv_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 47.678 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DCAF8L2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAGEB10-4:1
4.0 lnc-MAGEB10-4:1
4.1 lnc-MAGEB10-4:1
5.0 lnc-MAGEB10-4:1
5.1 lnc-GK-13:1
5.2 lnc-DCAF8L2-4:1